CDS

Accession Number TCMCG006C106844
gbkey CDS
Protein Id XP_013659924.1
Location complement(join(3281717..3281914,3281996..3282052,3282166..3282253,3282340..3282410,3282497..3282643,3282750..3282806,3282892..3282993,3283111..3283267,3283367..3283404,3283494..3283604,3283690..3283890,3283975..3284094,3284178..3284234,3284331..3284402,3284497..3284580,3284666..3284776,3284863..3284965,3285042..3285436))
Gene LOC106364969
GeneID 106364969
Organism Brassica napus

Protein

Length 722aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013804470.1
Definition nuclear pore complex protein NUP85-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore complex protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14304        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031080        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGGGTATGAATCCGAAACCCAGCGACGGATTACCCAACGGCGGAGAATTAGTTCCGTTTTCGACCAAGGAGAACTCTCCGGCGGTGTATCCTCTTCGCTACAGCCTCAAGTCTCGGCCTCACAGGCTCTCCATCTCCTGGGGGTGCGGGAACAACCTCCGCGTCACGGTTTTACGCAATCCGGAGCCGCGCGATGACGACGACGGCGGAGAAGCTGGCGGCGAGGTGGTGAACGTGAGGCTTAGCGGCGAGGACGGCGAGATCGGCGACGCGCAGTGGCGGAGGATCGCTTATGGATCTGTTTCTCCGTTTGCGCTTTTGCAGAGCAGGAGAAACTCGATTTCGAGCTTGTTTAAGATGGATACGAGTCCGTCTCTGTACCAGACTGCGTGGTGGGAGTATGTGATGGAGTACAGTAAGGAGATTAAGTCTCTTCTTAGTGATTCAGTGTCTTCTCCTGCTCCTTTGATTGAAGATCCAAGATCAGTTATAAAGAGTGCTGAGGAACCGACTTGTTTAAAGGCTGCGTGGGAGTTGATGGAAATGTTTTATGCTGACAAGACATGTCTGTCTTGGTGGCCAGAACGGCTCGTTGACTGGCTATCTGATTATGATGTACTTCTGTCAAGTGCACATCCAACTATCTACTCAAAGCTCGAGGATTTCCAAAAGGAACTTGTTGGCCTACAGGCTATCGAGGATGATCCAAGATACTGGGAAGTGATGTCATCTGCTTTATCAGTTGGTTGGCTAGAGATAGTGGTGAAGTTGTTACACTTGCATGGTTCTTATCAACTAGACCAGCTAGGAAATCGTGAGACAGAAAATGGTCTGGTAGAAGCTGTCGCTGTTCTCATTTCAAAAATGCCACGGATGCGTCCAAAACTAGAAGCTGGTATGTTTGGTGAATGCTTTGCAGCAAAGCCTGATTTTATGAAGACACGAGAAAGATGGCAGTCTCAGATAACTAAACTAGAGTGCAGTGCCTTCTGGGTTCAATGTGCTCACCGTCCGACCCGCGAGGGCTTGAGAAATATGTTGAAGATCATGATGGGAAATGCCGATTGCCTCTCAGCTGCGACATCTAACTGGATGGAGTTGTTTGTTTCACATTTACTCTATCTCAGGCCATTCACGAAGGGACTAGAAGGCATGCATAACCTTGCTCAGAAATGTGTTGAGTCAAAGCCAGTTAACACTTCCCATAAGCTTCTGAGGCTGCTTATTGGAATTCTTGGAGAGAATACTGAGGTTGTGCTGGCAGTTTGTTCCAAAGAGTTTGGCTCCTGGATGGTTGCACATGCGATGGAGTTATTGACAGCTGGAAGCGAAGAAGGGGAAGTTCTTGTACATGAGGAGCAGCGAAACTTGGGTGGAATCAACATGGAAGAGCTCCATAGACTTGTCTATGCTCAAGTTCTTTCTTCTCATGCTTTGACTTGGCAGATAGCTCCTGTTTATCTATCATCCTGCGAGAAACAGGGCCTAGGCTTATTAGAATTGTTGTTCTATAGGCAGCCAGTTCAAGACAATCAGCTGCTTATTAAGAGTCTAGAGATTTGCCGTCTATATGAACTTGGTTATGTCAGTGCTAAACTTATGAAGATCTCTGGAGTGCATCACTGGAAACATGGGAGGAAAGGGTCTGGGATTTTTTGGCTTCAGCAAGCACGGGACGAGCACTCTCTCAAAGTGATTTCTCAACAGCTGTTTGATTCTGTTGGAAAGTCATTGTCCGATGAAAGTCTCAAGCAATGGGAAGGCCTGGTCGAACTGCTGGGTTCCGACTCGCAGATCTCTGGTGGTCTTGATTTTCTTCACAAGTATAGAGATTTCAAGAGATCACTGAATCTCGTCAAGGATGGAAAAGCCATAGATGCGGCTCACGAAGCTGTGGAGAGACTTGTATCGCTAATGAAGAGCCCCTCTACTCCTCAACGCTTCTGGCTTCCTCTGCTGCATGATTCATTGAAGCTGTTGAATTGGCCAGAGCGTTCGCTGTTGAATGTAACACAGACCAACCTGATGTTGAACAAACTACAGGAAGCATCCATTGCAAAGATAAGACCAGGCTTCATAGAATCTGATTTGTCTGCTCAAGCTGTGAGTTCTGTGAGACTCGCTCTAGCAACAAATCTCGGACGTGCTTTCCTGGAAGAGTGTTAG
Protein:  
MPGMNPKPSDGLPNGGELVPFSTKENSPAVYPLRYSLKSRPHRLSISWGCGNNLRVTVLRNPEPRDDDDGGEAGGEVVNVRLSGEDGEIGDAQWRRIAYGSVSPFALLQSRRNSISSLFKMDTSPSLYQTAWWEYVMEYSKEIKSLLSDSVSSPAPLIEDPRSVIKSAEEPTCLKAAWELMEMFYADKTCLSWWPERLVDWLSDYDVLLSSAHPTIYSKLEDFQKELVGLQAIEDDPRYWEVMSSALSVGWLEIVVKLLHLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPKLEAGMFGECFAAKPDFMKTRERWQSQITKLECSAFWVQCAHRPTREGLRNMLKIMMGNADCLSAATSNWMELFVSHLLYLRPFTKGLEGMHNLAQKCVESKPVNTSHKLLRLLIGILGENTEVVLAVCSKEFGSWMVAHAMELLTAGSEEGEVLVHEEQRNLGGINMEELHRLVYAQVLSSHALTWQIAPVYLSSCEKQGLGLLELLFYRQPVQDNQLLIKSLEICRLYELGYVSAKLMKISGVHHWKHGRKGSGIFWLQQARDEHSLKVISQQLFDSVGKSLSDESLKQWEGLVELLGSDSQISGGLDFLHKYRDFKRSLNLVKDGKAIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPERSLLNVTQTNLMLNKLQEASIAKIRPGFIESDLSAQAVSSVRLALATNLGRAFLEEC